The Paraná's water levels are determined by what happens upstream in Brazil, where dams control the flow quite a bit, and this year there was less rainfall in those areas right when it historically rains the most. The drought you're mentioning is part of the picture, but the reality is that if it rains little in southern Brazil the consequence reaches the river directly: less water flowing down, less water passing through Paraguay and Argentina.
What you don't hear as much about is that deforestation in the Amazon basin also plays a role because it reduces the amount of moisture that gets recycled in the atmosphere, so it affects rainfall patterns at a regional level. It's a combination of factors, not just a one-off drought.