The single most important thing: super glue (CA) bonds to the surface but doesn't actually fill gaps, so if your seams were separating it's because there was probably a tiny void between parts. That's why epoxy or gap-filling CA formulas work way better for resin - they create a mechanical bond throughout the joint instead of just on top.
For resin models specifically, two-part epoxy is still the gold standard and honestly hasn't been meaningfully replaced. The stuff like Tamiya epoxy putty or similar two-part systems gives you working time (usually 5-10 minutes), fills small imperfections, and creates a bond that's actually stronger than the resin itself once cured. Gap-filling CA glues (the thicker formulations, not the runny stuff) are your second choice if you need speed - they're fast and work decent for tight-fitting parts, but you'll want a CA accelerator spray to cure them properly. The problem with standard thin CA is exactly what you ran into: it doesn't bridge gaps.
Some people swear by specialized resin adhesives like the ones from model manufacturers, but they're mostly just epoxy or CA under different branding, so don't feel like you need to hunt those down. One practical tip from my own builds: rough up the mating surfaces lightly with sandpaper first, clean off dust with a dry brush, and clamp or hold parts steady while the adhesive sets. Resin is smooth and slick, so glue alone won't hold if parts are just pressed together casually. If you're still getting separation, the issue's probably fit or prep rather than the adhesive itself.